Bioremediation & Bioprocess Development

There are innumerable strains of microbes under basic categories of bacteria, yeast or fungi, which degrade or transform chemicals and compounds into simpler, more desirable, or less harmful or toxic substances.  These bioprocesses have been used for centuries in the treatment of municipal wastes; wine, cheese and bread making; and for bioleaching and recovery of metals, such as copper.  The use of microorganisms takes advantage of the fact the microbes, like all living organisms, need nutrients (such as nitrogen, phosphate, and trace metals), carbon and energy to survive.  These beneficial microbes break down and transform a wide variety of inorganic and organic compounds to obtain energy for their growth.  For example, many species of soil bacteria can use petroleum hydrocarbons as a food or energy source, transforming them into harmless substances consisting mainly of carbon dioxide, water and fatty acids.  Bioprocess development has made it possible to greatly accelerate natural bioprocesses by selecting, concentrating and acclimating microorganisms to degrade or transform many inorganic and organic contaminants in a matter of weeks or months rather than decades.
The foundation of bioremediation has been the observation that over long periods of time and without human intervention, nature eliminates both natural and most man made pollution through natural bioprocesses. Bioremediation is a naturally occurring bioprocess that harnesses microbial and geochemical processes to degrade or transform (oxidize or reduce contaminants) environmental contaminants to innocuous end products.  Bioremediation processes promote the growth of microbes that can effectively degrade or transform specific contaminants, converting contaminants to nontoxic or more easily removed by-products.  Because indigenous bacteria are not always sufficient or suitable, the majority of bioremdiation processes, at field scale, benefit from the addition of supplemental products used separately or together:

Biostimulation - the process of providing key nutrients, vitamins, enzyme preparations and other factors to indigenous microbial populations that are necessary to promote their growth and metabolic activity used to degrade and transform contaminants.

Bioaugmentation – the process of introducing known blends of microorganism into a contaminated in situ environment or bioreactor to initiate and sustain a specific bioremediation process.

Scientists have found and isolated microorganisms with better biodegradation and biotransformation kinetics for a variety of contaminants within broad environmental habitats.  Center scientists have isolated and cultured microbes that express the qualities needed for field survival and function including the expression of enzymes able to degrade a broader range of compounds present in contaminated environments.  These microorganisms and enzymes are developed into bioprocesses and bioremediation strategies, tested at bench-scale and modified to address full-scale site requirements. 

Although not a panacea, bioremediation does offer a low-cost permanent solution for many environmental cleanup situations. It is a natural process alternative to conventional or traditional methods as incineration, catalytic destruction, the use of adsorbents, and the physical removal and subsequent destruction of pollutants. The economics of bioremediation are usually significantly more favorable than other techniques. The primary reason is in situ biological treatment there is no need for the hauling and expensive disposal costs of contaminated soils and high water-content wastes. 

 
By integrating proper utilization of natural microbial capabilities with appropriate engineering designs to provide suitable growth environments, field implementation of bioprocesses and bioremediation methods can be successful.  However, successful application of bioprocess and bioremediation techniques must address both the heterogeneous nature of many bioprocess environments and contaminated waste sites and the complexity of using living organisms. This stresses the necessity for biotreatability testing, i.e., determination of contaminant profiles, site environmental and microbial characteristics, key nutrients, etc. to allow configuration of site specific bioprocess and bioremediation requirements.
Using proprietary methods, different strains of bacteria are selected that work together to degrade or transform specific contaminants.  Because site conditions and types of products and contamination vary greatly,.  Products include only microbes capable of surviving and thriving in difficult environmental situations.   Site-specific bioprocesses and products are not always an instant cure-all, but in most cases result in a significant bioprocess improvement or a reduction of the contamination load.  Successful process and product use requires close collaboration between remediation, engineering, and waste management professionals.   Site analysis, biotreatability tests, and treatment goals are necessary before a project begins, and consistent monitoring during the treatment phase is critical.

The microbiology of any bioprocess or bioremediation is complex and it is important to have a qualified microbiologist available for all project aspects.  While individual microorganisms for any specific degradation or transformation may vary considerably, there are several generalizations that can be made for many bioprocesses:

  • Aerobic microbial environments are generally more competition based, whereas anaerobic communities, usually induce cooperation among organisms because the amount of energy available is less and organisms have become more specialized and interactive to get their small piece of energy
  • Competitive and noncompetitive environments – in competitive environments there is a superabundance of resources, there are enough resources and resource heterogeneity (diversity of carbon resources) so that each organism is successful – the converse is true in noncompetitive environments where the microbes become spatially isolated
  • Bioremediation in noncompetitive environments is often slow because the fastest growing microbes, on the pollutant, have no way to expand into new niches. This is termed the isolation factor, and it allows slow or ineffective metabolizers to dominate unless steps are taken to overcome this physical barrier
  • Bioremediation in competitive environments must use selective pressures, such as key nutrients, water availability, aeration level, pH, oxidation/reduction potentials, etc. to control or shift the microbial dominance to effective pollutant metabolizers and transformers

 

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